808
chapter 
3 5
Molecular Immunology
Cells and proteins that participate in the innate immune re-
sponse recognize generic “marker” molecules (e.g., com-
plex polysaccharides) on foreign microbes and other sub-
stances that are generally not found in the host. Attack on 
the “marked” invading microorganisms by phagocytes en-
gulf and destroy the infectious organisms. These phago-
cytic cells kill infectious microbes by releasing reactive 
oxygen species and nitric oxide that are produced by the 
phagocyte and by releasing enzymes that initiate pro-
grammed cell death (apoptosis). Organisms that are too 
large for phagocytosis, such as large parasites or worms, 
are attacked by a specialized leukocyte, the eosinophil, 
which is capable of injecting toxic substances into the or-
ganism to kill it.
The phagocytic cells, i.e., neutrophils, monocytes, 
macrophages, and dendritic cells, are myeloid cells that 
actively participate in innate immunity and are one lin-
eage of stem cell differentiation (Table 35-1). Mutations 
in myeloid cells are one of the causes of the 
myelocytic
leukemias.
The proteins of the complement system provide a sec-
ond line of defense for the infected host. 
Complement
pro-
teins are so named because they complement the action of 
the phagocytes and antibodies. However, antibodies are 
not involved in the action of complement in innate im-
mune response. Complement proteins, which are present 
in the circulating blood, attach covalently to bacterial cells 
and undergo a series of proteolytic reactions that activate 
the complement system and enhance the innate immune 
response. Binding of the complement activation products 
C3b and C4b and another plasma protein, CRP (C-reactive 
protein, one of a group of proteins called acute phase 
reactants) to the surface of foreign organisms is a pro-
cess called 
opsonization.
This process labels the organism 
as nonself and promotes adhesion of phagocytes to the 
invading microbes, resulting in phagocytosis of the op-
sonized organisms. The terminal product of complement 
activation, the membrane attack complex (MAC), creates 
a pore in the organism, making the microbe permeable 
to water and other solutes and ultimately causing the mi-
crobe to lyse. The MAC is composed of components C5b, 
C
6
, 
Cl,
C
8
, and C9 (see Table 35-3). Fragments pro-
duced during complement activation also act as chemo- 
tactic and inflammatory agents and attract phagocytes to 
the sites of invasion and injury and to the opsonized mi-
crobes. These potent products of complement activation 
cause blood vessel dilation and facilitate the movement 
of phagocytic cells from the bloodstream into the sur-
rounding tissues where the infectious organisms may be 
located. The innate immune response involves only one 
of three pathways by which complement is activated, i.e., 
the “alternative pathways of complement activation” (see 
complement).
35.2 Acquired or Adaptive Immunity
The general mechanisms responsible for innate immunity 
are inadequate to deal with all types of organisms, e.g., dif-
ferent strains of bacteria and viruses. These inadequacies 
are compensated for by the specific abilities of the acquired 
or adaptive immune system. Leukocytes, i.e., white blood 
cells (specifically B and T lymphocytes), are the agents of 
acquired immunity. B cells are so designated because they 
mature in the bone marrow; T cells because they mature in 
the thymus. B and T cells perform several biological pro-
cesses that are uniquely responsive to repeated infection 
by foreign organisms. Adaptive immune responses that are 
responsible for these unique properties of the immune sys-
tem occur in specialized regions (germinal centers) of the 
lymph nodes, the spleen, and mucosal lymphoid tissues, 
e.g., tonsils and adenoids.
Adaptive immunity provides a defence against some of 
the pathogens that avoid the innate immune system and 
can mount an attack against the evolving and ever chang-
ing characteristics of disease-causing organisms, e.g., dif-
ferent strains of bacteria and viruses, such as those that 
cause influenza.
Preexisting B-lymphocytes are present from birth and 
can recognize and bind antigens, more specifically 
epi-
topes
(restricted portions of the antigen), on infectious 
agents or foreign macromolecules. The receptors on a B- 
cell surface that recognize these epitopes are antibody 
molecules that are synthesized by the B cell. After en- 
docytosis and processing of the bound antigen by the 
B cell, the B cells are stimulated to divide and produce 
more B cells. This is a cooperative interaction between 
the B cells and specific T cells and signaling molecules 
called 
cytokines
that result in cooperative interactions 
with T cells is B-cell proliferation and differentiation. 
Some of the stimulated and proliferating B cells undergo 
a change to a specialized variety of B cell, called a 
plasma
cell.
The plasma cells synthesize large amounts of a spe-
cific antibody that recognizes an epitope on the antigen 
to which the B cell was originally bound. The antibod-
ies are secreted into the extracellular fluid where they 
provide a highly specific line of defense against current 
and future disease-causing agents. Other stimulated B 
cells differentiate to become very long-lived cells called 
memory cells.
The antibodies secreted by plasma cells are distributed 
to blood, lymph, and interstitial fluid where they are ca-
pable of binding to the infectious organism. Once these 
antibodies react with cell surface antigens on the in-
fectious organism or foreign macromolecule, the cell 
or macromolecule has a “signal” that attracts circulat-
ing complement proteins. This antibody-based component 
of acquired immunity is commonly designated 
humoral